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Displaying 0 - 9
| Scaffold 23 |
| Feature |
Type |
Strand |
Start |
Stop |
Confidence |
Note + |
ORNL |
BlastP |
Edit |
| Ref23.3 | Refgene | - | 126 | 914 | 0 |
Ref23.3 gene: or0020; label: or0020; note: 11; | ORNL | BlastP | Ref. |
| Ref23.4 | RefCDS | - | 126 | 914 | 0 |
Ref23.4 gene: or0020; label: or0020; product: possible ISCc1, transposase OrfB " ; function "KEGG top hit: 'ccr:CC2592 category=Unassigned, evalue=1e-20, 40% identity hit'; function: PFAM: 'similar to model=Transposase_11 description=Transposase DDE domain evalue=1.3e-10 score=44.7' ; codon_start: 1; transl_table: 11; evidence: not; note: GENE MODEL=glimmer; ; note: NR Hit: 'similar to (NC_002696) ISCc1, transposase OrfB [Caulobacter crescentus] ref|NP_420049.1| (NC_002696) ISCc1, transposase OrfB [Caulobacter crescentus] ref|NP_420849.1| (NC_002696) ISCc1, transposase OrfB [Caulobacter crescentus] ref|N-TRUNCATED-, evalue=2.00e-20, 40% identity hit '; | ORNL | BlastP | Ref. |
| 23.3 | gene | - | 126 | 914 | 0 |
23.3 gene: or0020; label: or0020; note: 11; | ORNL | BlastP | Edit |
| 23.4 | CDS | - | 126 | 914 | 0 |
23.4 gene: or0020; label: or0020; product: possible ISCc1, transposase OrfB " ; function "KEGG top hit: 'ccr:CC2592 category=Unassigned, evalue=1e-20, 40% identity hit'; function: PFAM: 'similar to model=Transposase_11 description=Transposase DDE domain evalue=1.3e-10 score=44.7' ; codon_start: 1; transl_table: 11; evidence: not; note: GENE MODEL=glimmer; ; note: NR Hit: 'similar to (NC_002696) ISCc1, transposase OrfB [Caulobacter crescentus] ref|NP_420049.1| (NC_002696) ISCc1, transposase OrfB [Caulobacter crescentus] ref|NP_420849.1| (NC_002696) ISCc1, transposase OrfB [Caulobacter crescentus] ref|N-TRUNCATED-, evalue=2.00e-20, 40% identity hit '; | ORNL | BlastP | Edit |
| Ref23.1 | Refgene | - | 476 | 883 | 0 |
Ref23.1 gene: or0019; label: or0019; note: 11; | ORNL | BlastP | Ref. |
| Ref23.2 | RefCDS | - | 476 | 883 | 0 |
Ref23.2 gene: or0019; label: or0019; product: putative transposase " ; function "KEGG top hit: 'mlo:mlr9643 category=Unassigned, evalue=1e-15, 38% identity hit'; function: COGs: 'Best hit=mlr9059 evalue=1e-14 score=76 category=L group=COG3293 Predicted transposase' ; codon_start: 1; transl_table: 11; evidence: not; note: "GENE MODEL=generation; note: NR Hit: 'similar to (NC_002682) transposase [Mesorhizobium loti] dbj|BAB54833.1| (AP003017) transposase [Mesorhizobium loti], evalue=3.00e-15, 38% identity hit '; glimmer=complement(476..901): ; critica=complement(476..883);: "; | ORNL | BlastP | Ref. |
| 23.1 | gene | - | 476 | 883 | 5 |
23.1 gene: or0019; label: or0019; | ORNL | BlastP | Edit |
| 23.2 | CDS | - | 476 | 883 | 5 |
23.2 gene: or0019; label: or0019; product: putative transposase "NR Hit: 'similar to (NC_002682) transposase [Mesorhizobium loti] dbj|BAB54833.1| (AP003017) transposase [Mesorhizobium loti], evalue=3.00e-15, 38% identity hit '; function: "KEGG top hit: 'mlo:mlr9643 category=Unassigned, evalue=1e-15, 38% identity hit'; function: COGs: 'Best hit=mlr9059 evalue=1e-14 score=76 category=L group=COG3293 Predicted transposase' ; codon_start: 1; transl_table: 11; evidence: not_experimental; note: "GENE MODEL=generation. critica agrees. Good match to best hit. glimmer uses GTG at 901.; | ORNL | BlastP | Edit |
| 23 | Component | | 1 | 1027 | 0 |
23 | None | None | Edit |
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