| Scaffold 25 |
| Feature |
Type |
Strand |
Start |
Stop |
Confidence |
Note + |
ORNL |
BlastP |
Edit |
| Ref25.1 | Refgene | + | 54 | 593 | 0 |
Ref25.1 gene: or0025; label: or0025; note: 11; | ORNL | BlastP | Ref. |
| Ref25.2 | RefCDS | + | 54 | 593 | 0 |
Ref25.2 gene: or0025; label: or0025; product: putative transposase " ; function "KEGG top hit: 'pae:PA3993 category=Unassigned, evalue=5e-19, 42% identity hit'; function: PFAM: 'similar to model=Transposase_20 description=Transposase IS116/IS110/IS902 family evalue=1.3 score=-37.2' ; codon_start: 1; transl_table: 11; evidence: not; note: GENE MODEL=glimmer; ; note: NR Hit: 'similar to (NC_002516) probable transposase [Pseudomonas aeruginosa] ref|NP_251009.1| (NC_002516) probable transposase [Pseudomonas aeruginosa] ref|NP_251380.1| (NC_002516) probable transposase [Pseudomonas aeruginosa] ref|NP_252124.-TRUNCATED-, evalue=1.00e-18, 42% identity hit '; | ORNL | BlastP | Ref. |
| 25.1 | gene | + | 54 | 593 | 0 |
25.1 gene: or0025; label: or0025; note: 11; | ORNL | BlastP | Edit |
| 25.2 | CDS | + | 54 | 593 | 0 |
25.2 gene: or0025; label: or0025; product: putative transposase " ; function "KEGG top hit: 'pae:PA3993 category=Unassigned, evalue=5e-19, 42% identity hit'; function: PFAM: 'similar to model=Transposase_20 description=Transposase IS116/IS110/IS902 family evalue=1.3 score=-37.2' ; codon_start: 1; transl_table: 11; evidence: not; note: GENE MODEL=glimmer; ; note: NR Hit: 'similar to (NC_002516) probable transposase [Pseudomonas aeruginosa] ref|NP_251009.1| (NC_002516) probable transposase [Pseudomonas aeruginosa] ref|NP_251380.1| (NC_002516) probable transposase [Pseudomonas aeruginosa] ref|NP_252124.-TRUNCATED-, evalue=1.00e-18, 42% identity hit '; | ORNL | BlastP | Edit |
| 25 | Component | | 1 | 2410 | 0 |
25 | None | None | Edit |
| Ref25.3 | Refgene | + | 664 | 1002 | 0 |
Ref25.3 gene: or0026; label: or0026; note: 0; | ORNL | BlastP | Ref. |
| Ref25.4 | RefCDS | + | 664 | 1002 | 0 |
Ref25.4 gene: or0026; label: or0026; product: hypothetical; codon_start: 1; transl_table: 11; evidence: not; note: GENE MODEL=glimmer; ; | ORNL | BlastP | Ref. |
| 25.3 | gene | + | 664 | 1002 | 0 |
25.3 gene: or0026; label: or0026; note: 0; | ORNL | BlastP | Edit |
| 25.4 | CDS | + | 664 | 1002 | 0 |
25.4 gene: or0026; label: or0026; product: hypothetical; codon_start: 1; transl_table: 11; evidence: not; note: GENE MODEL=glimmer; ; | ORNL | BlastP | Edit |
| Ref25.7 | Refgene | - | 1080 | 2408 | 0 |
Ref25.7 gene: or0028; label: or0028; note: 11; | ORNL | BlastP | Ref. |
| Ref25.8 | RefCDS | - | 1080 | 2408 | 0 |
Ref25.8 gene: or0028; label: or0028; product: probable glyceraldehyde-3-phosphate dehydrogenase " ; function "KEGG top hit: 'pae:PA2323 category=Unassigned, evalue=0.0, 83% identity hit'; function: PFAM: 'similar to model=aldedh description=Aldehyde dehydrogenase family evalue=1.6e-15 score=-11.1' " ; function "COGs: 'Best hit=PA2323 evalue=e-178 score=622 category=C group=COG1012 NAD-dependent aldehyde dehydrogenases' ; codon_start: 1; transl_table: 11; evidence: not; note: GENE MODEL=critica; ; note: NR Hit: 'similar to (NC_002516) probable glyceraldehyde-3-phosphate dehydrogenase [Pseudomonas aeruginosa] pir||F83355 probable glyceraldehyde-3-phosphate dehydrogenase PA2323 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG-TRUNCATED-, evalue=0.00e+00, 83% identity hit '; | ORNL | BlastP | Ref. |
| 25.7 | gene | - | 1080 | 2408 | 0 |
25.7 gene: or0028; label: or0028; note: 11; | ORNL | BlastP | Edit |
| 25.8 | CDS | - | 1080 | 2408 | 0 |
25.8 gene: or0028; label: or0028; product: probable glyceraldehyde-3-phosphate dehydrogenase " ; function "KEGG top hit: 'pae:PA2323 category=Unassigned, evalue=0.0, 83% identity hit'; function: PFAM: 'similar to model=aldedh description=Aldehyde dehydrogenase family evalue=1.6e-15 score=-11.1' " ; function "COGs: 'Best hit=PA2323 evalue=e-178 score=622 category=C group=COG1012 NAD-dependent aldehyde dehydrogenases' ; codon_start: 1; transl_table: 11; evidence: not; note: GENE MODEL=critica; ; note: NR Hit: 'similar to (NC_002516) probable glyceraldehyde-3-phosphate dehydrogenase [Pseudomonas aeruginosa] pir||F83355 probable glyceraldehyde-3-phosphate dehydrogenase PA2323 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG-TRUNCATED-, evalue=0.00e+00, 83% identity hit '; | ORNL | BlastP | Edit |
| Ref25.5 | Refgene | + | 1272 | 2231 | 0 |
Ref25.5 gene: or0027; label: or0027; note: 11; | ORNL | BlastP | Ref. |
| Ref25.6 | RefCDS | + | 1272 | 2231 | 0 |
Ref25.6 gene: or0027; label: or0027; product: possible Domain of unknown function (DUF309) " ; function "PFAM: 'similar to model=DUF309 description=Domain of unknown function (DUF309) evalue=3.5 score=-29.7' ; codon_start: 1; transl_table: 11; evidence: not; note: GENE MODEL=generation; ; | ORNL | BlastP | Ref. |
| 25.5 | gene | + | 1272 | 2231 | 0 |
25.5 gene: or0027; label: or0027; note: 11; | ORNL | BlastP | Edit |
| 25.6 | CDS | + | 1272 | 2231 | 0 |
25.6 gene: or0027; label: or0027; product: possible Domain of unknown function (DUF309) " ; function "PFAM: 'similar to model=DUF309 description=Domain of unknown function (DUF309) evalue=3.5 score=-29.7' ; codon_start: 1; transl_table: 11; evidence: not; note: GENE MODEL=generation; ; | ORNL | BlastP | Edit |
